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Publications

Year Published
Authors
Article Title
Journal Name
Research Line
Links
2022
Fariña, Antonio; Gagie, Travis; Grabowski, Szymon; Manzini, Giovanni; Navarro, Gonzalo; Ordóñez, Alberto
Efficient and compact representations of some non-canonical prefix-free codes
Theoretical Computer Science
Bioinformatics (BI)
https://doi.org/10.1016/j.tcs.2022.01.010
2022
Sandoval-Sanhueza, Alondra; Aguilera-Belmonte, Alejandra; Basti, Leila; Figueroa, Rosa, I; Molinet, Carlos; Alvarez, Gonzalo; Oyanedel, Sandra; Riobo, Pilar; Mancilla-Gutierrez, Guido; Diaz, Patricio A.
Interactive effects of temperature and salinity on the growth and cytotoxicity of the fish-killing microalgal species Heterosigma akashiwo and Pseudochattonella verruculosa
MARINE POLLUTION BULLETIN
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.marpolbul.2021.113234
2022
González‐González, Mirna; Picó, Guillermo; Lima, Álvaro Silva; Ussemane Mussagy, Cassamo; Pereira, Jorge Fernando Brandão; Fernandez‐Lahore, Hector Marcelo; Asenjo, Juan A.; Rito‐Palomares, Marco
Aqueous two‐phase systems in Latin America: perspective and future trends
Journal of Chemical Technology & Biotechnology
Metabolomics and Metabolic Engineering (ME)
http://dx.doi.org/10.1002/jctb.6890
2022
Buschmann, A.H.
Seaweed and Microalgae as Alternative Sources of Protein. Burleigh Dodds Series in Agricultural Sciences
Journal of Phycology
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://onlinelibrary.wiley.com/doi/epdf/10.1111/jpy.13224
2022
Oróstica, Karen Y.; Contreras, Sebastian; Sanchez-Daza, Anamaria; Fernandez, Jorge; Priesemann, Viola; Olivera-Nappa, Álvaro
New year, new SARS-CoV-2 variant: Resolutions on genomic surveillance protocols to face Omicron
The Lancet Regional Health - Americas
Mathematical Modelling (MM)
10.1016/j.lana.2022.100203
2022
Mangano, M.C.; Berlino, M.; Corbari, L.; Milisenda, G.; Lucchese, M.; Terzo, S.; Bosch-Belmar, M.; Azaza, M.S.; Babarro, J.M.F.; Bakiu, R.; Broitman, B.R.; Buschmann, A.H.; Christofoletti, R.; Dong, Y.; Glamuzina, B.; Luthman, O.; Makridis, P.; Nogueira, A.J.A.; Palomo, M.G.; Dineshram, R.; et al.
The aquaculture supply chain in the time of covid-19 pandemic: Vulnerability, resilience, solutions and priorities at the global scale
Environmental Science & Policy
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
doi.org/10.1016/j.envsci.2021.10.014
2022
Ashton, Gail V.; Freestone, Amy L.; Duffy, J. Emmett; Torchin, Mark E.; Sewall, Brent J.; Tracy, Brianna; Albano, Mariano; Altieri, Andrew H.; Altvater, Luciana; Bastida-Zavala, Rolando; Bortolus, Alejandro; Brante, Antonio; Bravo, Viviana; Brown, Norah; Buschmann, Alejandro H.; Buskey, Edward; Barrera, Rosita Calderón; Cheng, Brian; Collin, Rachel; Coutinho, Ricardo; et al.
Predator control of marine communities increases with temperature across 115 degrees of latitude
Science
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
10.1126/science.abc4916
2022
Casado-Díaz, Juan; Conca, Carlos; Vásquez-Varas, Donato
Minimization of the p-Laplacian first eigenvalue for a two-phase material
Journal of Computational and Applied Mathematics
Mathematical Modelling (MM)
https://doi.org/10.1016/j.cam.2021.113722
2022
Conca, C.
Modelling Our Sense of Smell
SEMA SIMAI Springer Series
Mathematical Modelling (MM)
https://doi.org/10.1007/978-3-030-86236-7_3
2022
Camus, Carolina; Leal, Pablo P.; Faugeron, Sylvain; Henríquez-Antipa, Luis A.; Fernández, Pamela A.; Cook, Sebastián; Cárcamo, P. Francisco; Vargas, Jaime; Uribe, Daniela; Buschmann, Alejandro H.
First report of the intentionally introduced kelp, Saccharina japonica, in the Pacific coast of southern Chile
Algal Research
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.algal.2022.102750
2022
Díaz, Patricio A.; Álvarez, Gonzalo; Pizarro, Gemita; Blanco, Juan; Reguera, Beatriz
Lipophilic Toxins in Chile: History, Producers and Impacts
Marine Drugs
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.3390/md20020122
2022
Cumsille, Patricio; González-Marín, Juan; Honorato, Gerardo; Lugo, Diego
Disconnected Julia set of Halley's method for exponential maps
Dynamical Systems
Mathematical Modelling (MM)
https://doi.org/10.1080/14689367.2022.2048633
2022
Gómez-Silva, Benito; Batista-García, Ramón Alberto
The Atacama Desert: A Biodiversity Hotspot and Not Just a Mineral-Rich Region
Frontiers in Microbiology
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.3389/fmicb.2022.812842
2022
Leyton, Allison; Shene, Carolina; Chisti, Yusuf; Asenjo, Juan A.
Production of Carotenoids and Phospholipids by Thraustochytrium sp. in Batch and Repeated-Batch Culture
Marine Drugs
Metabolomics and Metabolic Engineering (ME)
10.3390/md20070416
2022
Olivera-Nappa, Álvaro; Contreras, Sebastian; Tevy, María Florencia; Medina-Ortiz, David; Leschot, Andrés; Vigil, Pilar; Conca, Carlos
Patient-Wise Methodology to Assess Glycemic Health Status: Applications to Quantify the Efficacy and Physiological Targets of Polyphenols on Glycemic Control
Frontiers in Nutrition
Mathematical Modelling (MM)
https://doi.org/10.3389/fnut.2022.831696
2022
Rodríguez‐Martínez, Raquel; Vaqué, Dolors; Forn, Irene; Massana, Ramon
Dominant marine heterotrophic flagellates are adapted to natural planktonic bacterial abundances
Environmental Microbiology
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
10.1111/1462-2920.15911
2022
Cumsille, Patricio; Rojas-Diaz, Oscar; Moisset de Espanes, Pablo; Verdugo-Hernandez, Paula
Forecasting COVID-19 Chile' second outbreak by a generalized SIR model with constant time delays and a fitted positivity rate
MATHEMATICS AND COMPUTERS IN SIMULATION
Mathematical Modelling (MM)
https://doi.org/10.1016/j.matcom.2021.09.016
2022
Bălilescu, Loredana; Conca, Carlos; Ghosh, Tuhin; Martín, Jorge San; Vanninathan, Muthusamy
Bloch wave spectral analysis in the class of generalized Hashin–Shtrikman micro-structures
Mathematical Models and Methods in Applied Sciences
Mathematical Modelling (MM)
https://doi.org/10.1142/S0218202522500129
2022
Baldrich, Ángela M.; Molinet, Carlos; Reguera, Beatriz; Espinoza-González, Oscar; Pizarro, Gemita; Rodríguez-Villegas, Camilo; Opazo, David; Mejías, Patricio; Díaz, Patricio A.
Interannual variability in mesoscale distribution of Dinophysis acuminata and D. acuta in Northwestern Patagonian fjords
Harmful Algae
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.hal.2022.102228
2022
Troell, M.; Henriksson, P. J. G.; Buschmann, A. H.; Chopin, T.; Quahe, S.
Farming the Ocean – Seaweeds as a Quick Fix for the Climate?
Reviews in Fisheries Science & Aquaculture
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1080/23308249.2022.2048792
2022
Molina-Grima, Emilio; García-Camacho, Francisco; Acién-Fernández, Francisco Gabriel; Sánchez-Mirón, Asterio; Plouviez, Maxence; Shene, Carolina; Chisti, Yusuf
Pathogens and predators impacting commercial production of microalgae and cyanobacteria
Biotechnology Advances
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.biotechadv.2021.107884
2022
Covarrubias, Cristian; Bejarano, Julián; Maureira, Miguel; Tapia, Cecilia; Díaz, Mario; Rodríguez, Juan P; Palza, Humberto; Lund, Fernando; Von Marttens, Alfredo; Caviedes, Pablo; Yazdani-Pedram, Mehrdad
Preparation of osteoinductive – Antimicrobial nanocomposite scaffolds based on poly (D,L-lactide-co-glycolide) modified with copper – Doped bioactive glass nanoparticles
Polymers and Polymer Composites
Metabolomics and Metabolic Engineering (ME)
https://doi.org/10.1177/09673911221098231
2022
Jose Martinez-Harms, Maria; Armesto, Juan J.; Carlos Castilla, Juan; Astorga, Anna; Aylwin, Jose; Buschmann, Alejandro H.; Castro, Victoria; Daneri, Giovanni; Fernandez, Miriam; Fuentes-Castillo, Taryn; Gelcich, Stefan; Gonzalez, Humberto E.; Hucke-Gaete, Rodrigo; Marquet, Pablo A.; Morello, Flavia; Nahuelhual, Laura; Pliscoff, Patricio; Reid, Brian; Rozzi, Ricardo; Guala, Cesar; et al.
A systematic evidence map of conservation knowledge in Chilean Patagonia
CONSERVATION SCIENCE AND PRACTICE
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1111/csp2.575
2022
Ovando-Leon, Gabriel; Veas-Castillo, Luis; Gil-Costa, Veronica; Marin, Mauricio
Bot-Based Emergency Software Applications for Natural Disaster Situations
Future Internet
Bioinformatics (BI)
https://doi.org/10.3390/fi14030081
2021
Moglia, Italo; Santiago, Margarita; Guerrero, Simon; Soler, Mónica; Olivera-Nappa, Alvaro; Kogan, Marcelo J.
Enhanced Cellular Uptake of H-Chain Human Ferritin Containing Gold Nanoparticles
Pharmaceutics
Protein Engineering (PE)
10.3390/pharmaceutics13111966
2021
Naylor, Rosamond L.; Hardy, Ronald W.; Buschmann, Alejandro H.; Bush, Simon R.; Cao, Ling; Klinger, Dane H.; Little, David C.; Lubchenco, Jane; Shumway, Sandra E.; Troell, Max
A 20-year retrospective review of global aquaculture (vol 591, pg 551, 2021)
NATURE
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
2021
Gonzalez, K.; Navia, R.; Liu, Shijie; Cea, Mara
Biological Approaches in Polyhydroxyalkanoates Recovery
CURRENT MICROBIOLOGY
MG
https://doi.org/10.1007/s00284-020-02263-1
2021
Landeta-Salgado, Catalina; Cicatiello, Paola; Lienqueo, María Elena
Mycoprotein and hydrophobin like protein produced from marine fungi Paradendryphiella salina in submerged fermentation with green seaweed Ulva spp.
Algal Research
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.algal.2021.102314
2021
Belazzougui, Djamal; Caceres, Manuel; Gagie, Travis; Gawrychowski, Pawel; Kaerkkaeinen, Juha; Navarro, Gonzalo; Ordonez, Alberto; Puglisi, Simon J.; Tabei, Yasuo
Block trees
JOURNAL OF COMPUTER AND SYSTEM SCIENCES
BI
https://doi.org/10.1016/j.jcss.2020.11.002
2021
Sankaranarayanan, Sivashunmugam; Hariram, Muruganandham; Vivekanandhan, Singaravelu; Navia, Rodrigo
Sustainable biocarbon materials derived from Lessonia Trabeculata macroalgae biomass residue for supercapacitor applications
Energy Storage
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1002/est2.222
2021
Sara, G.; Mangano, M. C.; Berlino, M.; Corbari, L.; Lucchese, M.; Milisenda, G.; Terzo, S.; Azaza, M. S.; Babarro, J. M. F.; Bakiu, R.; Broitman, B. R.; Buschmann, A. H.; Christofoletti, R.; Deidun, A.; Dong, Y.; Galdies, J.; Glamuzina, B.; Luthman, O.; Makridis, P.; Nogueira, A. J. A.; et al.
The Synergistic Impacts of Anthropogenic Stressors and COVID-19 on Aquaculture: A Current Global Perspective
REVIEWS IN FISHERIES SCIENCE AQUACULTURE
MG
https://doi.org/10.1080/23308249.2021.1876633
2021
Navarro, Gonzalo
Indexing Highly Repetitive String Collections, Part II: Compressed Indexes
ACM COMPUTING SURVEYS
BI
https://doi.org/10.1145/3432999
2021
Diaz, Patricio A.; Perez-Santos, Ivan; Alvarez, Gonzalo; Garreaud, Rene; Pinilla, Elias; Diaz, Manuel; Sandoval, Alondra; Araya, Michael; Alvarez, Francisco; Rengel, Jose; Montero, Paulina; Pizarro, Gemita; Lopez, Loreto; Iriarte, Luis; Igor, Gabriela; Reguera, Beatriz
Multiscale physical background to an exceptional harmful algal bloomof Dinophysis acuta in a fjord system
SCIENCE OF THE TOTAL ENVIRONMENT
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.scitotenv.2021.145621
2021
Aran, Pablo; Aguilar, Pablo; Bowen, Thomas; Farson, Matthew; Tapia, Joseline; Vimercati, Lara; Darcy, John L.; Solon, Adam J.; Porazinska, Dorota; Schmidt, Steven K.; Dorador, Cristina
Insights into an undescribed high-elevation lake (6,170 m a.s.l.) on Volcan Llullaillaco: A physical and microbiological view
AQUATIC CONSERVATION-MARINE AND FRESHWATER ECOSYSTEMS
MG
https://doi.org/10.1002/aqc.3612
2021
Landeta-Salgado, Catalina; Cicatiello, Paola; Stanzione, Ilaria; Medina, David; Berlanga Mora, Isadora; Gomez, Carlos; Lienqueo, María Elena
The growth of marine fungi on seaweed polysaccharides produces cerato-platanin and hydrophobin self-assembling proteins
Microbiological Research
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.micres.2021.126835
2021
Brain-Isasi, Stephanie; Caru, Claudia; Elena Lienqueo, Maria
Valorization of the green seaweed Ulva rigida for production of fungal biomass protein using a hypercellulolytic terrestrial fungus
ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS
Molecular Genetics, Extremophiles, and Ecophysiology (MG); Protein Engineering (PE)
https://doi.org/10.1016/j.algal.2021.102457
2021
Leyton, Allison; Araya, Michael; Tala, Fadia; Flores, Liset; Lienqueo, Maria Elena; Shene, Carolina
Macrocystis pyrifera Extract Residual as Nutrient Source for the Production of Sophorolipids Compounds by Marine Yeast Rhodotorula rubra
MOLECULES
MG
https://doi.org/10.3390/molecules26082355
2021
Leyton, Allison; Flores, Liset; Shene, Carolina; Chisti, Yusuf; Larama, Giovanni; Asenjo, Juan A.; Armenta, Roberto E.
Antarctic Thraustochytrids as Sources of Carotenoids and High-Value Fatty Acids
Marine Drugs
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.3390/md19070386
2021
Belazzougui, Djamal; Caceres, Manuel; Gagie, Travis; Gawrychowski, Pawel; Kaerkkaeinen, Juha; Navarro, Gonzalo; Ordonez, Alberto; Puglisi, Simon J.; Tabei, Yasuo
Block trees
JOURNAL OF COMPUTER AND SYSTEM SCIENCES
Bioinformatics (BI)
https://doi.org/10.1016/j.jcss.2020.11.002
2021
Cáceres, Luis; Frez, Yohana; Galleguillos, Felipe; Soliz, Alvaro; Gómez-Silva, Benito; Borquez, Jorge
Aqueous Dried Extract of Skytanthus acutus Meyen as Corrosion Inhibitor of Carbon Steel in Neutral Chloride Solutions
Metals
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.3390/met11121992
2021
Salgado, Catalina Landeta; Munoz, Rosa; Blanco, Adriana; Lienqueo, Maria Elena
Valorization and upgrading of the nutritional value of seaweed and seaweed waste using the marine fungi Paradendryphiella salina to produce mycoprotein
ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS
MG
https://doi.org/10.1016/j.algal.2020.102135
2021
Celis-Pla, Paula S. M.; Luis Kappes, Jose; Figueroa, Felix L.; Pereda, Sandra, V; Villegas, Karina; Altamirano, Robinson; Carmen Hernandez-Gonzalez, Maria; Buschmann, Alejandro H.
Solar Radiation as an Isolated Environmental Factor in an Experimental Mesocosm Approach for Studying Photosynthetic Acclimation of Macrocystis pyrifera (Ochrophyta)
FRONTIERS IN PLANT SCIENCE
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
10.3389/fpls.2021.622150
2021
Molina, Veronica; Eissler, Yoanna; Fernandez, Camila; Cornejo-D'Ottone, Marcela; Dorador, Cristina; Bebout, Brad M.; Jeffrey, Wade H.; Romero, Carlos; Hengst, Martha
Greenhouse gases and biogeochemical diel fluctuations in a high-altitude wetland
SCIENCE OF THE TOTAL ENVIRONMENT
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi. org/10.1016/j.scitotenv.2020.144370.
2021
Baldrich, Angela M.; Perez-Santos, Ivan; Alvarez, Gonzalo; Reguera, Beatriz; Fernandez-Pena, Concepcion; Rodriguez-Villegas, Camilo; Araya, Michael; Alvarez, Francisco; Barrera, Facundo; Karasiewicz, Stephane; Diaz, Patricio A.
Niche differentiation of Dinophysis acuta and D. acuminata in a stratified fjord
HARMFUL ALGAE
MG
https://doi.org/10.1016/j.hal.2021.102010
2021
Landeta-Salgado, Catalina; Cicatiello, Paola; Lienqueo, María Elena
Mycoprotein and hydrophobin like protein produced from marine fungi Paradendryphiella salina in submerged fermentation with green seaweed Ulva spp.
Algal Research
MG
https://doi.org/10.1016/j.algal.2021.102314
2021
Navarro, Gonzalo
Indexing Highly Repetitive String Collections, Part II: Compressed Indexes
ACM COMPUTING SURVEYS
Bioinformatics (BI)
https://doi.org/10.1145/3432999
2021
Román, C.; López-López, N.; Houenou, J.; Poupon, C.; Mangin, J.-F.; Hernández, C.; Guevara, P.
Study Of Precentral-Postcentral Connections On Hcp Data Using Probabilistic Tractography And Fiber Clustering
IEEE 18th International Symposium on Biomedical Imaging (ISBI)
Bioinformatics (BI)
10.1109/ISBI48211.2021.9434093
2021
Claude, Francisco; Navarro, Gonzalo; Pacheco, Alejandro
Grammar-compressed indexes with logarithmic search time
JOURNAL OF COMPUTER AND SYSTEM SCIENCES
Bioinformatics (BI)
https://doi.org/10.1016/j.jcss.2020.12.001
2021
Osorio, Ignacio; Guevara, Miguel; Bonometti, Danilo; Carrasco, Diego; Descoteaux, Maxime; Poupon, Cyril; Mangin, Jean-François; Hernández, Cecilia; Guevara, Pamela
ABrainVis: an android brain image visualization tool
BioMedical Engineering OnLine
Bioinformatics (BI)
https://doi.org/10.1186/s12938-021-00909-0
2021
Bauer, Simon; Contreras, Sebastian; Dehning, Jonas; Linden, Matthias; Iftekhar, Emil; Mohr, Sebastian B.; Olivera-Nappa, Alvaro; Priesemann, Viola; Struchiner, Claudio José
Relaxing restrictions at the pace of vaccination increases freedom and guards against further COVID-19 waves
PLOS Computational Biology
Mathematical Modelling (MM)
10.1371/journal.pcbi.1009288.
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