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Publications

Year Published
Authors
Article Title
Journal Name
Research Line
Links
2022
Ovando-Leon, Gabriel; Veas-Castillo, Luis; Gil-Costa, Veronica; Marin, Mauricio
Bot-Based Emergency Software Applications for Natural Disaster Situations
Future Internet
Bioinformatics (BI)
https://doi.org/10.3390/fi14030081
2022
Jose Martinez-Harms, Maria; Armesto, Juan J.; Carlos Castilla, Juan; Astorga, Anna; Aylwin, Jose; Buschmann, Alejandro H.; Castro, Victoria; Daneri, Giovanni; Fernandez, Miriam; Fuentes-Castillo, Taryn; Gelcich, Stefan; Gonzalez, Humberto E.; Hucke-Gaete, Rodrigo; Marquet, Pablo A.; Morello, Flavia; Nahuelhual, Laura; Pliscoff, Patricio; Reid, Brian; Rozzi, Ricardo; Guala, Cesar; et al.
A systematic evidence map of conservation knowledge in Chilean Patagonia
CONSERVATION SCIENCE AND PRACTICE
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1111/csp2.575
2022
Covarrubias, Cristian; Bejarano, Julián; Maureira, Miguel; Tapia, Cecilia; Díaz, Mario; Rodríguez, Juan P; Palza, Humberto; Lund, Fernando; Von Marttens, Alfredo; Caviedes, Pablo; Yazdani-Pedram, Mehrdad
Preparation of osteoinductive – Antimicrobial nanocomposite scaffolds based on poly (D,L-lactide-co-glycolide) modified with copper – Doped bioactive glass nanoparticles
Polymers and Polymer Composites
Metabolomics and Metabolic Engineering (ME)
https://doi.org/10.1177/09673911221098231
2022
Molina-Grima, Emilio; García-Camacho, Francisco; Acién-Fernández, Francisco Gabriel; Sánchez-Mirón, Asterio; Plouviez, Maxence; Shene, Carolina; Chisti, Yusuf
Pathogens and predators impacting commercial production of microalgae and cyanobacteria
Biotechnology Advances
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.biotechadv.2021.107884
2022
Troell, M.; Henriksson, P. J. G.; Buschmann, A. H.; Chopin, T.; Quahe, S.
Farming the Ocean – Seaweeds as a Quick Fix for the Climate?
Reviews in Fisheries Science & Aquaculture
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1080/23308249.2022.2048792
2022
Baldrich, Ángela M.; Molinet, Carlos; Reguera, Beatriz; Espinoza-González, Oscar; Pizarro, Gemita; Rodríguez-Villegas, Camilo; Opazo, David; Mejías, Patricio; Díaz, Patricio A.
Interannual variability in mesoscale distribution of Dinophysis acuminata and D. acuta in Northwestern Patagonian fjords
Harmful Algae
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.hal.2022.102228
2022
Bălilescu, Loredana; Conca, Carlos; Ghosh, Tuhin; Martín, Jorge San; Vanninathan, Muthusamy
Bloch wave spectral analysis in the class of generalized Hashin–Shtrikman micro-structures
Mathematical Models and Methods in Applied Sciences
Mathematical Modelling (MM)
https://doi.org/10.1142/S0218202522500129
2022
Cumsille, Patricio; Rojas-Diaz, Oscar; Moisset de Espanes, Pablo; Verdugo-Hernandez, Paula
Forecasting COVID-19 Chile' second outbreak by a generalized SIR model with constant time delays and a fitted positivity rate
MATHEMATICS AND COMPUTERS IN SIMULATION
Mathematical Modelling (MM)
https://doi.org/10.1016/j.matcom.2021.09.016
2022
Rodríguez‐Martínez, Raquel; Vaqué, Dolors; Forn, Irene; Massana, Ramon
Dominant marine heterotrophic flagellates are adapted to natural planktonic bacterial abundances
Environmental Microbiology
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
10.1111/1462-2920.15911
2022
Olivera-Nappa, Álvaro; Contreras, Sebastian; Tevy, María Florencia; Medina-Ortiz, David; Leschot, Andrés; Vigil, Pilar; Conca, Carlos
Patient-Wise Methodology to Assess Glycemic Health Status: Applications to Quantify the Efficacy and Physiological Targets of Polyphenols on Glycemic Control
Frontiers in Nutrition
Mathematical Modelling (MM)
https://doi.org/10.3389/fnut.2022.831696
2022
Leyton, Allison; Shene, Carolina; Chisti, Yusuf; Asenjo, Juan A.
Production of Carotenoids and Phospholipids by Thraustochytrium sp. in Batch and Repeated-Batch Culture
Marine Drugs
Metabolomics and Metabolic Engineering (ME)
10.3390/md20070416
2022
Gómez-Silva, Benito; Batista-García, Ramón Alberto
The Atacama Desert: A Biodiversity Hotspot and Not Just a Mineral-Rich Region
Frontiers in Microbiology
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.3389/fmicb.2022.812842
2022
Cumsille, Patricio; González-Marín, Juan; Honorato, Gerardo; Lugo, Diego
Disconnected Julia set of Halley's method for exponential maps
Dynamical Systems
Mathematical Modelling (MM)
https://doi.org/10.1080/14689367.2022.2048633
2022
Díaz, Patricio A.; Álvarez, Gonzalo; Pizarro, Gemita; Blanco, Juan; Reguera, Beatriz
Lipophilic Toxins in Chile: History, Producers and Impacts
Marine Drugs
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.3390/md20020122
2022
Camus, Carolina; Leal, Pablo P.; Faugeron, Sylvain; Henríquez-Antipa, Luis A.; Fernández, Pamela A.; Cook, Sebastián; Cárcamo, P. Francisco; Vargas, Jaime; Uribe, Daniela; Buschmann, Alejandro H.
First report of the intentionally introduced kelp, Saccharina japonica, in the Pacific coast of southern Chile
Algal Research
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.algal.2022.102750
2022
Conca, C.
Modelling Our Sense of Smell
SEMA SIMAI Springer Series
Mathematical Modelling (MM)
https://doi.org/10.1007/978-3-030-86236-7_3
2022
Casado-Díaz, Juan; Conca, Carlos; Vásquez-Varas, Donato
Minimization of the p-Laplacian first eigenvalue for a two-phase material
Journal of Computational and Applied Mathematics
Mathematical Modelling (MM)
https://doi.org/10.1016/j.cam.2021.113722
2022
Ashton, Gail V.; Freestone, Amy L.; Duffy, J. Emmett; Torchin, Mark E.; Sewall, Brent J.; Tracy, Brianna; Albano, Mariano; Altieri, Andrew H.; Altvater, Luciana; Bastida-Zavala, Rolando; Bortolus, Alejandro; Brante, Antonio; Bravo, Viviana; Brown, Norah; Buschmann, Alejandro H.; Buskey, Edward; Barrera, Rosita Calderón; Cheng, Brian; Collin, Rachel; Coutinho, Ricardo; et al.
Predator control of marine communities increases with temperature across 115 degrees of latitude
Science
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
10.1126/science.abc4916
2022
Mangano, M.C.; Berlino, M.; Corbari, L.; Milisenda, G.; Lucchese, M.; Terzo, S.; Bosch-Belmar, M.; Azaza, M.S.; Babarro, J.M.F.; Bakiu, R.; Broitman, B.R.; Buschmann, A.H.; Christofoletti, R.; Dong, Y.; Glamuzina, B.; Luthman, O.; Makridis, P.; Nogueira, A.J.A.; Palomo, M.G.; Dineshram, R.; et al.
The aquaculture supply chain in the time of covid-19 pandemic: Vulnerability, resilience, solutions and priorities at the global scale
Environmental Science & Policy
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
doi.org/10.1016/j.envsci.2021.10.014
2022
Oróstica, Karen Y.; Contreras, Sebastian; Sanchez-Daza, Anamaria; Fernandez, Jorge; Priesemann, Viola; Olivera-Nappa, Álvaro
New year, new SARS-CoV-2 variant: Resolutions on genomic surveillance protocols to face Omicron
The Lancet Regional Health - Americas
Mathematical Modelling (MM)
10.1016/j.lana.2022.100203
2022
Buschmann, A.H.
Seaweed and Microalgae as Alternative Sources of Protein. Burleigh Dodds Series in Agricultural Sciences
Journal of Phycology
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://onlinelibrary.wiley.com/doi/epdf/10.1111/jpy.13224
2022
González‐González, Mirna; Picó, Guillermo; Lima, Álvaro Silva; Ussemane Mussagy, Cassamo; Pereira, Jorge Fernando Brandão; Fernandez‐Lahore, Hector Marcelo; Asenjo, Juan A.; Rito‐Palomares, Marco
Aqueous two‐phase systems in Latin America: perspective and future trends
Journal of Chemical Technology & Biotechnology
Metabolomics and Metabolic Engineering (ME)
http://dx.doi.org/10.1002/jctb.6890
2022
Sandoval-Sanhueza, Alondra; Aguilera-Belmonte, Alejandra; Basti, Leila; Figueroa, Rosa, I; Molinet, Carlos; Alvarez, Gonzalo; Oyanedel, Sandra; Riobo, Pilar; Mancilla-Gutierrez, Guido; Diaz, Patricio A.
Interactive effects of temperature and salinity on the growth and cytotoxicity of the fish-killing microalgal species Heterosigma akashiwo and Pseudochattonella verruculosa
MARINE POLLUTION BULLETIN
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.marpolbul.2021.113234
2022
Fariña, Antonio; Gagie, Travis; Grabowski, Szymon; Manzini, Giovanni; Navarro, Gonzalo; Ordóñez, Alberto
Efficient and compact representations of some non-canonical prefix-free codes
Theoretical Computer Science
Bioinformatics (BI)
https://doi.org/10.1016/j.tcs.2022.01.010
2021
Leyton, Allison; Araya, Michael; Tala, Fadia; Flores, Liset; Lienqueo, Maria Elena; Shene, Carolina
Macrocystis pyrifera Extract Residual as Nutrient Source for the Production of Sophorolipids Compounds by Marine Yeast Rhodotorula rubra
MOLECULES
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.3390/molecules26082355
2021
Jarmusch, Scott A.; Lagos-Susaeta, Diego; Diab, Emtinan; Salazar, Oriana; Asenjo, Juan A.; Ebel, Rainer; Jaspars, Marcel
Iron-meditated fungal starvation by lupine rhizosphere-associated and extremotolerant Streptomyces sp. S29 desferrioxamine production
MOLECULAR OMICS
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1039/D0MO00084A
2021
Glaria, Felipe; Hernandez, Cecilia; Ladra, Susana; Navarro, Gonzalo; Salinas, Lilian
Compact structure for sparse undirected graphs based on a clique graph partition
INFORMATION SCIENCES
Bioinformatics (BI)
2021
Navarro, Gonzalo
Indexing Highly Repetitive String Collections, Part I: Repetitiveness Measures
ACM COMPUTING SURVEYS
Bioinformatics (BI)
https://doi.org/10.1145/3434399
2021
Glaria, Felipe; Hernandez, Cecilia; Ladra, Susana; Navarro, Gonzalo; Salinas, Lilian
Compact structure for sparse undirected graphs based on a clique graph partition
INFORMATION SCIENCES
BI
2021
Coloquio de Nutrigenómica y Biotecnología Acuícola, CONYBA
Resumen en extenso: Acuicultura Integrada Multi-Trófica (IMTA) y sus desafíos para el secuestro de carbono y biomitigación de procesos de eutrofización costera
Revista Bio Ciencias
MG
https://doi.org/10.15741/revbio.08Suppl.e1182
2021
Boucher, Christina; Gagie, Travis ; Tomohiro, I; Koppl, Dominik ; Langmead, Ben; Manzini, Giovanni; Navarro, Gonzalo ; Pacheco, Alejandro; Rossi, Massimiliano
PHONI: Streamed Matching Statistics with Multi-Genome References
2021 Data Compression Conference (DCC)
Bioinformatics (BI)
10.1109/DCC50243.2021.00027
2021
Aran, Pablo; Aguilar, Pablo; Bowen, Thomas; Farson, Matthew; Tapia, Joseline; Vimercati, Lara; Darcy, John L.; Solon, Adam J.; Porazinska, Dorota; Schmidt, Steven K.; Dorador, Cristina
Insights into an undescribed high-elevation lake (6,170 m a.s.l.) on Volcan Llullaillaco: A physical and microbiological view
AQUATIC CONSERVATION-MARINE AND FRESHWATER ECOSYSTEMS
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1002/aqc.3612
2021
Navarro, Gonzalo; Ochoa, Carlos; Prezza, Nicola
On the Approximation Ratio of Ordered Parsings
IEEE TRANSACTIONS ON INFORMATION THEORY
BI
http://dx.doi.org/10.1109/TIT.2020.3042746
2021
Acevedo Tapia, P.; Amrouche, C.; Conca, C.; Ghosh, A.
Stokes and Navier-Stokes equations with Navier boundary conditions
JOURNAL OF DIFFERENTIAL EQUATIONS
Mathematical Modelling (MM)
https://doi.org/10.1016/j.jde.2021.02.045
2021
Rojas, Oscar; Gil-Costa, Veronica; Marin, Mauricio
A DFT-Based Running Time Prediction Algorithm for Web Queries
FUTURE INTERNET
Bioinformatics (BI)
https://doi.org/10.3390/fi13080204
2021
Christiansen, Anders Roy; Ettienne, Mikko Berggren; Kociumaka, Tomasz; Navarro, Gonzalo; Prezza, Nicola
Optimal-Time Dictionary-Compressed Indexes
ACM TRANSACTIONS ON ALGORITHMS
BI
https://doi.org/10.1145/3426473
2021
Baldrich, Angela M.; Perez-Santos, Ivan; Alvarez, Gonzalo; Reguera, Beatriz; Fernandez-Pena, Concepcion; Rodriguez-Villegas, Camilo; Araya, Michael; Alvarez, Francisco; Barrera, Facundo; Karasiewicz, Stephane; Diaz, Patricio A.
Niche differentiation of Dinophysis acuta and D. acuminata in a stratified fjord
HARMFUL ALGAE
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.hal.2021.102010
2021
Leal, Pablo P.; Roleda, Michael Y.; Fernández, Pamela A.; Nitschke, Udo; Hurd, Catriona L.; Buschmann, A.
Reproductive phenology and morphology of Macrocystis pyrifera (Laminariales, Ochrophyta) from southern New Zealand in relation to wave exposure 1
Journal of Phycology
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1111/jpy.13190
2021
Coloquio de Nutrigenómica y Biotecnología Acuícola, CONYBA
Resumen en extenso: Acuicultura Integrada Multi-Trófica (IMTA) y sus desafíos para el secuestro de carbono y biomitigación de procesos de eutrofización costera
Revista Bio Ciencias
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.15741/revbio.08Suppl.e1182
2021
Goicovich, Isaac; Olivares, Paulo; Román, Claudio; Vázquez, Andrea; Poupon, Cyril; Mangin, Jean-François; Guevara, Pamela; Hernández, Cecilia
Fiber Clustering Acceleration With a Modified Kmeans++ Algorithm Using Data Parallelism
Frontiers in Neuroinformatics
Bioinformatics (BI)
https://doi.org/10.3389/fninf.2021.727859
2021
Christiansen, Anders Roy; Ettienne, Mikko Berggren; Kociumaka, Tomasz; Navarro, Gonzalo; Prezza, Nicola
Optimal-Time Dictionary-Compressed Indexes
ACM TRANSACTIONS ON ALGORITHMS
Bioinformatics (BI)
https://doi.org/10.1145/3426473
2021
Martinez, Pablo; Jaime, Daniela; Contreras, Daniela; Moreno, Monica; Bonacic, Carolina; Marin, Mauricio
Design and validation of an instrument for selecting spontaneous volunteers during emergencies in natural disasters
INTERNATIONAL JOURNAL OF DISASTER RISK REDUCTION
BI
https://doi.org/10.1016/j.ijdrr.2021.102243
2021
Florez, July Z.; Camus, Carolina; Hengst, Martha B.; Buschmann, Alejandro H.; Graham, M.
A mesocosm study on bacteria‐kelp interactions: Importance of nitrogen availability and kelp genetics
Journal of Phycology
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1111/jpy.13213
2021
Perez-Santos, Ivan; Diaz, Patricio A.; Silva, Nelson; Garreaud, Rene; Montero, Paulina; Henriquez-Castillo, Carlos; Barrera, Facundo; Linford, Pamela; Amaya, Constanza; Contreras, Sergio; Aracena, Claudia; Pinilla, Elias; Altamirano, Robinson; Vallejos, Luis; Pavez, Javiera; Maulen, Juan
Oceanography time series reveals annual asynchrony input between oceanic and estuarine waters in Patagonian fjords
SCIENCE OF THE TOTAL ENVIRONMENT
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
10.1016/j.scitotenv.2021.149241
2021
Zárate, Ana; Dorador, Cristina; Valdés, Jorge; Molina, Verónica; Icaza, Gonzalo; Pacheco, Aldo S.; Castillo, Alexis
Benthic microbial diversity trends in response to heavy metals in an oxygen-deficient eutrophic bay of the Humboldt current system offshore the Atacama Desert
Environmental Pollution
MG
https://doi.org/10.1016/j.envpol.2021.117281
2021
Orrego, Patricio R.; Serrano-Rodríguez, Mayela; Cortez, Mauro; Araya, Jorge E.
In Silico Characterization of Calcineurin from Pathogenic Obligate Intracellular Trypanosomatids: Potential New Biological Roles
Biomolecules
Bioinformatics (BI)
10.3390/biom11091322
2021
Salgado, Catalina Landeta; Munoz, Rosa; Blanco, Adriana; Lienqueo, Maria Elena
Valorization and upgrading of the nutritional value of seaweed and seaweed waste using the marine fungi Paradendryphiella salina to produce mycoprotein
ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1016/j.algal.2020.102135
2021
Martinez, Pablo; Jaime, Daniela; Contreras, Daniela; Moreno, Monica; Bonacic, Carolina; Marin, Mauricio
Design and validation of an instrument for selecting spontaneous volunteers during emergencies in natural disasters
INTERNATIONAL JOURNAL OF DISASTER RISK REDUCTION
Bioinformatics (BI)
https://doi.org/10.1016/j.ijdrr.2021.102243
2021
Camus, Carolina; Solas, Maribel; Martinez, Camila; Vargas, Jaime; Garces, Cristobal; Gil-Kodaka, Patricia; Ladah, Lydia B.; Serrao, Ester A.; Faugeron, Sylvain
Mates Matter: Gametophyte Kinship Recognition and Inbreeding in the Giant Kelp, Macrocystis pyrifera (Laminariales, Phaeophyceae)
JOURNAL OF PHYCOLOGY
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1111/jpy.13146
2021
Gonzalez, K.; Navia, R.; Liu, Shijie; Cea, Mara
Biological Approaches in Polyhydroxyalkanoates Recovery
CURRENT MICROBIOLOGY
Molecular Genetics, Extremophiles, and Ecophysiology (MG)
https://doi.org/10.1007/s00284-020-02263-1
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