Publications

Year Published
Authors
Article Title
Journal Name
Research Line
Links
2021
Santibanez, Luciana; Henriquez, Constanza; Corro-Tejeda, Romina; Bernal, Sebastian; Armijo, Benjamin; Salazar, Oriana
Xylooligosaccharides from lignocellulosic biomass: A comprehensive review
CARBOHYDRATE POLYMERS
MG
https://doi.org/10.1016/j.carbpol.2020.117118
2021
Navarro, Gonzalo
Indexing Highly Repetitive String Collections, Part I: Repetitiveness Measures
ACM COMPUTING SURVEYS
BI
https://doi.org/10.1145/3434399
2021
Glaria, Felipe; Hernandez, Cecilia; Ladra, Susana; Navarro, Gonzalo; Salinas, Lilian
Compact structure for sparse undirected graphs based on a clique graph partition
INFORMATION SCIENCES
BI
2021
Claude, Francisco; Navarro, Gonzalo; Pacheco, Alejandro
Grammar-compressed indexes with logarithmic search time
JOURNAL OF COMPUTER AND SYSTEM SCIENCES
BI
https://doi.org/10.1016/j.jcss.2020.12.001
2021
Navarro, Gonzalo; Ochoa, Carlos; Prezza, Nicola
On the Approximation Ratio of Ordered Parsings
IEEE TRANSACTIONS ON INFORMATION THEORY
BI
http://dx.doi.org/10.1109/TIT.2020.3042746
2021
Navarro, Gonzalo
Indexing Highly Repetitive String Collections, Part II: Compressed Indexes
ACM COMPUTING SURVEYS
BI
https://doi.org/10.1145/3432999
2021
Gonzalez-Puelma, Jorge; Aldridge, Jacqueline; Montes de Oca, Marco; Pinto, Monica; Uribe-Paredes, Roberto; Fernandez-Goycoolea, Jose; Alvarez-Saravia, Diego; Alvarez, Hermy; Encina, Gonzalo; Weitzel, Thomas; Munoz, Rodrigo; Olivera-Nappa, Alvaro; Pantano, Sergio; Navarrete, Marcelo A.
Mutation in a SARS-CoV-2 Haplotype from Sub-Antarctic Chile Reveals New Insights into the Spike's Dynamics
VIRUSES-BASEL
PE
https://doi.org/10.3390/v13050883
2021
Aran, Pablo; Aguilar, Pablo; Bowen, Thomas; Farson, Matthew; Tapia, Joseline; Vimercati, Lara; Darcy, John L.; Solon, Adam J.; Porazinska, Dorota; Schmidt, Steven K.; Dorador, Cristina
Insights into an undescribed high-elevation lake (6,170 m a.s.l.) on Volcan Llullaillaco: A physical and microbiological view
AQUATIC CONSERVATION-MARINE AND FRESHWATER ECOSYSTEMS
MG
https://doi.org/10.1002/aqc.3612
2021
Gonzalez, K.; Navia, R.; Liu, Shijie; Cea, Mara
Biological Approaches in Polyhydroxyalkanoates Recovery
CURRENT MICROBIOLOGY
MG
https://doi.org/10.1007/s00284-020-02263-1
2021
Coloquio de Nutrigenómica y Biotecnología Acuícola, CONYBA
Resumen en extenso: Acuicultura Integrada Multi-Trófica (IMTA) y sus desafíos para el secuestro de carbono y biomitigación de procesos de eutrofización costera
Revista Bio Ciencias
MG
https://doi.org/10.15741/revbio.08Suppl.e1182
2021
Martinez, Pablo; Jaime, Daniela; Contreras, Daniela; Moreno, Monica; Bonacic, Carolina; Marin, Mauricio
Design and validation of an instrument for selecting spontaneous volunteers during emergencies in natural disasters
INTERNATIONAL JOURNAL OF DISASTER RISK REDUCTION
BI
https://doi.org/10.1016/j.ijdrr.2021.102243
2021
Contreras, Sebastian; Dehning, Jonas; Loidolt, Matthias; Zierenberg, Johannes; Spitzner, F. Paul; Urrea-Quintero, Jorge H.; Mohr, Sebastian B.; Wilczek, Michael; Wibral, Michael; Priesemann, Viola
The challenges of containing SARS-CoV-2 via test-trace-and-isolate
NATURE COMMUNICATIONS
PE
https://doi.org/10.1038/s41467-020-20699-8
2021
Martinez, Pablo; Jaime, Daniela; Contreras, Daniela; Moreno, Monica; Bonacic, Carolina; Marin, Mauricio
Design and validation of an instrument for selecting spontaneous volunteers during emergencies in natural disasters
INTERNATIONAL JOURNAL OF DISASTER RISK REDUCTION
BI
https://doi.org/10.1016/j.ijdrr.2021.102243
2021
Christiansen, Anders Roy; Ettienne, Mikko Berggren; Kociumaka, Tomasz; Navarro, Gonzalo; Prezza, Nicola
Optimal-Time Dictionary-Compressed Indexes
ACM TRANSACTIONS ON ALGORITHMS
BI
https://doi.org/10.1145/3426473
2021
Camus, Carolina; Solas, Maribel; Martinez, Camila; Vargas, Jaime; Garces, Cristobal; Gil-Kodaka, Patricia; Ladah, Lydia B.; Serrao, Ester A.; Faugeron, Sylvain
Mates Matter: Gametophyte Kinship Recognition and Inbreeding in the Giant Kelp, Macrocystis pyrifera (Laminariales, Phaeophyceae)
JOURNAL OF PHYCOLOGY
MG
https://doi.org/10.1111/jpy.13146
2021
Zuniga, Lidia M.; Andrade, Juan-Carlos; Fabrega-Gueren, Francisca; Orihuela, Pedro A.; Velasquez, Ethel V.; Vidal, Elena A.; Gutierrez, Rodrigo A.; Morales, Patricio; Gomez-Silva, Benito; Croxatto, Horacio B.
Mating induces early transcriptional response in the rat endosalpinx: the role of TNF and RA
REPRODUCTION
MG
https://doi.org/10.1530/REP-20-0190
2021
Fernandez, Pamela A.; Navarro, Jorge M.; Camus, Carolina; Torres, Rodrigo; Buschmann, Alejandro H.
Effect of environmental history on the habitat-forming kelp Macrocystis pyrifera responses to ocean acidification and warming: a physiological and molecular approach
SCIENTIFIC REPORTS
MG
https://doi.org/10.3390/app10134623
2021
Vilchez, Ariel; Acevedo, Francisca; Cea, Mara; Seeger, Michael; Navia, Rodrigo
Development and thermochemical characterization of an antioxidant material based on polyhydroxybutyrate electrospun microfibers
International Journal of Biological Macromolecules
MG
https://doi.org/10.1016/j.ijbiomac.2021.05.002
2021
Gonzalez, K.; Navia, R.; Liu, Shijie; Cea, Mara
Biological Approaches in Polyhydroxyalkanoates Recovery
CURRENT MICROBIOLOGY
MG
https://doi.org/10.1007/s00284-020-02263-1
2021
Landeta-Salgado, Catalina; Cicatiello, Paola; Lienqueo, María Elena
Mycoprotein and hydrophobin like protein produced from marine fungi Paradendryphiella salina in submerged fermentation with green seaweed Ulva spp.
Algal Research
MG
https://doi.org/10.1016/j.algal.2021.102314
2021
Jarmusch, Scott A.; Lagos-Susaeta, Diego; Diab, Emtinan; Salazar, Oriana; Asenjo, Juan A.; Ebel, Rainer; Jaspars, Marcel
Iron-meditated fungal starvation by lupine rhizosphere-associated and extremotolerant Streptomyces sp. S29 desferrioxamine production
MOLECULAR OMICS
MG
https://doi.org/10.1039/D0MO00084A
2021
Acevedo Tapia, P.; Amrouche, C.; Conca, C.; Ghosh, A.
Stokes and Navier-Stokes equations with Navier boundary conditions
JOURNAL OF DIFFERENTIAL EQUATIONS
MM
https://doi.org/10.1016/j.jde.2021.02.045
2021
Glaria, Felipe; Hernandez, Cecilia; Ladra, Susana; Navarro, Gonzalo; Salinas, Lilian
Compact structure for sparse undirected graphs based on a clique graph partition
INFORMATION SCIENCES
BI
2021
Molina, Veronica; Eissler, Yoanna; Fernandez, Camila; Cornejo-D'Ottone, Marcela; Dorador, Cristina; Bebout, Brad M.; Jeffrey, Wade H.; Romero, Carlos; Hengst, Martha
Greenhouse gases and biogeochemical diel fluctuations in a high-altitude wetland
SCIENCE OF THE TOTAL ENVIRONMENT
MG
https://doi. org/10.1016/j.scitotenv.2020.144370.
2021
Sara, G.; Mangano, M. C.; Berlino, M.; Corbari, L.; Lucchese, M.; Milisenda, G.; Terzo, S.; Azaza, M. S.; Babarro, J. M. F.; Bakiu, R.; Broitman, B. R.; Buschmann, A. H.; Christofoletti, R.; Deidun, A.; Dong, Y.; Galdies, J.; Glamuzina, B.; Luthman, O.; Makridis, P.; Nogueira, A. J. A.; et al.
The Synergistic Impacts of Anthropogenic Stressors and COVID-19 on Aquaculture: A Current Global Perspective
REVIEWS IN FISHERIES SCIENCE AQUACULTURE
MG
https://doi.org/10.1080/23308249.2021.1876633
2021
Zárate, Ana; Dorador, Cristina; Valdés, Jorge; Molina, Verónica; Icaza, Gonzalo; Pacheco, Aldo S.; Castillo, Alexis
Benthic microbial diversity trends in response to heavy metals in an oxygen-deficient eutrophic bay of the Humboldt current system offshore the Atacama Desert
Environmental Pollution
MG
https://doi.org/10.1016/j.envpol.2021.117281
2021
Leyton, Allison; Araya, Michael; Tala, Fadia; Flores, Liset; Lienqueo, Maria Elena; Shene, Carolina
Macrocystis pyrifera Extract Residual as Nutrient Source for the Production of Sophorolipids Compounds by Marine Yeast Rhodotorula rubra
MOLECULES
MG
https://doi.org/10.3390/molecules26082355
2021
Salgado, Catalina Landeta; Munoz, Rosa; Blanco, Adriana; Lienqueo, Maria Elena
Valorization and upgrading of the nutritional value of seaweed and seaweed waste using the marine fungi Paradendryphiella salina to produce mycoprotein
ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS
MG
https://doi.org/10.1016/j.algal.2020.102135
2021
Belazzougui, Djamal; Caceres, Manuel; Gagie, Travis; Gawrychowski, Pawel; Kaerkkaeinen, Juha; Navarro, Gonzalo; Ordonez, Alberto; Puglisi, Simon J.; Tabei, Yasuo
Block trees
JOURNAL OF COMPUTER AND SYSTEM SCIENCES
BI
https://doi.org/10.1016/j.jcss.2020.11.002
2020
Amrouche C.; Conca C.; Ghosh A.; Ghosh T.
Uniform W1 , p estimates for an elliptic operator with Robin boundary condition in a C1 domain
Calculus of Variations & Partial Differential Equations
MM
https://link.springer.com/article/10.1007%2Fs00526-020-1713-y
2020
Navarro, Gonzalo
Indexing Highly Repetitive String Collections
arXiv
BI
https://arxiv.org/abs/2004.02781
2020
Alarcon, C.; Shene, C.
Fermentation 4.0, a case study on computer vision, soft sensor, connectivity, and control applied to the fermentation of a thraustochytrid
COMPUTERS IN INDUSTRY
MM
https://doi.org/10.1016/j.compind.2021.103431
2020
Soto, Javier E.; Ubisse, Paulo; Hernandez, Cecilia; Figueroa, Miguel; Trost, A; Zemva, A; Skavhaug, A
A hardware accelerator for entropy estimation using the top-k most frequent elements
2020 23RD EUROMICRO CONFERENCE ON DIGITAL SYSTEM DESIGN (DSD 2020)
BI
https://doi.org/10.1109/DSD51259.2020.00032
2020
Fernandez, Gabriela; Arias-Bravo, Guisselle; Bevilacqua, Jorge A.; Castillo-Ruiz, Mario; Caviedes, Pablo; Saez, Juan C.; Cea, Luis A.
Myofibers deficient in connexins 43 and 45 expression protect mice from skeletal muscle and systemic dysfunction promoted by a dysferlin mutation
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE
MM
https://doi.org/10.1016/j.bbadis.2020.165800
2020
Munro J.I.; Navarro G.; Nekrich Y.
Fast Compressed Self-indexes with Deterministic Linear-Time Construction
Algorithmica
BI
https://doi.org/10.1007/s00453-019-00637-x
2020
Shene, Carolina; Paredes, Paris; Flores, Liset; Leyton, Allison; Asenjo, Juan A.; Chisti, Yusuf
Dynamic flux balance analysis of biomass and lipid production by Antarctic thraustochytrid Oblongichytrium sp. RT2316-13
BIOTECHNOLOGY AND BIOENGINEERING
MG
https://doi.org/10.1002/bit.27463
2020
Kosolobov, Dmitry; Valenzuela, Daniel; Navarro, Gonzalo; Puglisi, Simon J.
Lempel-Ziv-Like Parsing in Small Space
ALGORITHMICA
BI
https://doi.org/10.3390/molecules26082355
2020
Gagie T.; He M.; Navarro G.
Compressed Dynamic Range Majority and Minority Data Structures
Algorithmica
BI
https://doi.org/10.1007/s00453-020-00687-6
2020
Conca, C.; Orive, R.; Martín, J. San; Solano, V.
On the graphene Hamiltonian operator
Computational and Applied Mathematics
MM
https://doi.org/10.1007/s40314-019-0986-2
2020
Contreras, Sebastian; Andres Villavicencio, H.; Medina-Ortiz, David; Pablo Biron-Lattes, Juan; Olivera-Nappa, Alvaro
A multi -group SEIRA model for the spread of COVID-19 among heterogeneous populations
CHAOS SOLITONS AND FRACTALS
MM
2020
Leiva-Vega J.; Villalobos-Carvajal R.; Ferrari G.; Donsì F.; Zúñiga R.N.; Shene C.; Beldarraín-Iznaga T.
Influence of interfacial structure on physical stability and antioxidant activity of curcumin multilayer emulsions
Food and Bioproducts Processing
MG
https://doi.org/10.1016/j.fbp.2020.01.010
2020
Hidalgo, Juan Saez; Oróstica, Karen Y; Sanchez–Daza, Anamaria; Olivera–Nappa, Álvaro; Jonathan, Wren
BEST: a Shiny/R web-based application to easily retrieve cross-related enzyme functional parameters and information from BRENDA
Bioinformatics
PE
2020
Contador C.A.; Veas-Castillo L.; Tapia E.; Antipán M.; Miranda N.; Ruiz-Tagle B.; García-Araya J.; Andrews B.A.; Marin M.; Dorador C.; Asenjo J.A.
Atacama Database: a platform of the microbiome of the Atacama Desert
Antonie van Leeuwenhoek
ME
https://doi.org/10.1007/s10482-019-01328-x
2020
Bustamante M.; Oomah B.D.; Oliveira W.P.; Burgos-Díaz C.; Rubilar M.; Shene C.
Probiotics and prebiotics potential for the care of skin, female urogenital tract, and respiratory tract
Folia Microbiologica
MG
https://doi.org/10.1007/s12223-019-00759-3
2020
Buschmann, Alejandro H.; Villegas, Karina; Pereda, Sandra V.; Camus, Carolina; Kappes, Jose L.; Altamirano, Robinson; Vallejos, Luis; Hernandez-Gonzalez, Maria C.
Enhancing yield on Macrocystis pyrifera (Ochrophyta): The effect of gametophytic developmental strategy
ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS
MG
https://doi.org/10.1016/j.algal.2020.102124
2020
Contreras, Sebastian; Pablo Biron-Lattes, Juan; Andres Villavicencio, H.; Medina-Ortiz, David; Llanovarced-Kawles, Nyna; Olivera-Nappa, Alvaro
Statistically-based methodology for revealing real contagion trends and correcting delay-induced errors in the assessment of COVID-19 pandemic
CHAOS SOLITONS AND FRACTALS
MM
https://doi.org/10.1016/j.chaos.2020.110087
2020
Lakshmi, D. Shanthana; Sankaranarayanan, Sivashunmugam; Gajaria, Tejal K.; Li, Guoqiang; Kujawski, Wojciech; Kujawa, Joanna; Navia, Rodrigo
A Short Review on the Valorization of Green Seaweeds and Ulvan: FEEDSTOCK for Chemicals and Biomaterials
BIOMOLECULES
MG
2020
Bustamante, Mariela; Laurie-Martinez, Loreto; Vergara, Daniela,; Campos-Vega, Rocio; Rubilar, Monica; Shene, Carolina.
Effect of Three Polysaccharides (Inulin, and Mucilage from Chia and Flax Seeds) on the Survival of Probiotic Bacteria Encapsulated by Spray Drying
APPLIED SCIENCES-BASEL
MG
2020
Huerta, Isaias; Vazquez, Andrea; Lopez-Lopez, Narciso; Houenou, Josselin; Poupon, Cyril; Mangin, Jean-Francois; Guevara, Pamela; Hernandez, Cecilia; IEEE
Inter-Subject Clustering of Brain Fibers from Whole-Brain Tractography
42ND ANNUAL INTERNATIONAL CONFERENCES OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY: ENABLING INNOVATIVE TECHNOLOGIES FOR GLOBAL HEALTHCARE EMBC'20
BI
https://doi.org/10.1109/EMBC44109.2020.9175342
2020
Zadjelovic V.; Chhun A.; Quareshy M.; Silvano E.; Hernandez-Fernaud J.R.; Aguilo-Ferretjans M.M.; Bosch R.; Dorador C.; Gibson M.I.; Christie-Oleza J.A.
Beyond oil degradation: enzymatic potential of Alcanivorax to degrade natural and synthetic polyesters
Environmental Microbiology
MG
https://doi.org/10.1111/1462-2920.14947
Page 1 of 9